Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CX3CR1P49238 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CX3CR1P49238 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.14□□□□□ -0.15
CX3CR1P49238 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.14□□□□□ -0.15
CX3CR1P49238 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.14□□□□□ -0.15
CX3CR1P49238 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.14□□□□□ -0.15
CX3CR1P49238 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.14□□□□□ -0.15
CX3CR1P49238 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.14□□□□□ -0.15
CX3CR1P49238 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.14□□□□□ -0.15
CX3CR1P49238 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.14□□□□□ -0.15
CX3CR1P49238 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CX3CR1P49238 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CX3CR1P49238 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CX3CR1P49238 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.14□□□□□ -0.15
CX3CR1P49238 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.13□□□□□ -0.15
CX3CR1P49238 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CX3CR1P49238 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 AC022532.1-201ENST00000624563 1728 ntBASIC14.13□□□□□ -0.15
CX3CR1P49238 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
CX3CR1P49238 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CX3CR1P49238 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.13□□□□□ -0.15
CX3CR1P49238 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CX3CR1P49238 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.13□□□□□ -0.15
CX3CR1P49238 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.13□□□□□ -0.15
CX3CR1P49238 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.13□□□□□ -0.15
CX3CR1P49238 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.13□□□□□ -0.15
CX3CR1P49238 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.13□□□□□ -0.15
CX3CR1P49238 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.13□□□□□ -0.15
CX3CR1P49238 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
CX3CR1P49238 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CX3CR1P49238 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.13□□□□□ -0.15
CX3CR1P49238 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.13□□□□□ -0.15
CX3CR1P49238 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CX3CR1P49238 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.13□□□□□ -0.15
CX3CR1P49238 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.13□□□□□ -0.15
CX3CR1P49238 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CX3CR1P49238 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.13□□□□□ -0.15
CX3CR1P49238 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.12□□□□□ -0.15
CX3CR1P49238 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CX3CR1P49238 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.12□□□□□ -0.15
CX3CR1P49238 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CX3CR1P49238 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CX3CR1P49238 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CX3CR1P49238 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.12□□□□□ -0.15
CX3CR1P49238 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CX3CR1P49238 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.12□□□□□ -0.15
CX3CR1P49238 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.12□□□□□ -0.15
CX3CR1P49238 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CX3CR1P49238 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CX3CR1P49238 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CX3CR1P49238 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.12□□□□□ -0.15
CX3CR1P49238 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.12□□□□□ -0.15
CX3CR1P49238 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms