Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 FO393414.2-201ENST00000405153 598 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 MIR1233-2-201ENST00000408138 82 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 MIR1233-1-201ENST00000408722 82 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC6A12P48065 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC6A12P48065 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC6A12P48065 AC109322.1-201ENST00000524499 1264 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC6A12P48065 AC069262.1-201ENST00000539058 672 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC6A12P48065 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SLC6A12P48065 LINC00628-201ENST00000628516 1289 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 AC013268.4-201ENST00000637413 2228 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC6A12P48065 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SLC6A12P48065 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC6A12P48065 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A12P48065 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
SLC6A12P48065 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC073347.1-201ENST00000421633 2643 ntBASIC15.4■□□□□ 0.06
SLC6A12P48065 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
SLC6A12P48065 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 AL139400.1-201ENST00000366220 510 ntBASIC15.4■□□□□ 0.06
SLC6A12P48065 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A12P48065 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A12P48065 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A12P48065 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.4■□□□□ 0.06
SLC6A12P48065 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A12P48065 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC6A12P48065 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC6A12P48065 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A12P48065 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A12P48065 AC009090.5-201ENST00000624886 2285 ntBASIC15.4■□□□□ 0.06
SLC6A12P48065 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.39■□□□□ 0.06
SLC6A12P48065 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A12P48065 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A12P48065 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SLC6A12P48065 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 MTND6P24-201ENST00000440466 518 ntBASIC15.39■□□□□ 0.05
SLC6A12P48065 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC6A12P48065 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC6A12P48065 AL079307.3-201ENST00000556114 283 ntBASIC15.39■□□□□ 0.05
SLC6A12P48065 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SLC6A12P48065 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms