Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.14■□□□□ 0.33
SSR1P43307 AC109635.5-201ENST00000533593 962 ntBASIC17.14■□□□□ 0.33
SSR1P43307 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.14■□□□□ 0.33
SSR1P43307 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.14■□□□□ 0.33
SSR1P43307 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 AL078644.1-201ENST00000609881 752 ntBASIC17.14■□□□□ 0.33
SSR1P43307 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SSR1P43307 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.14■□□□□ 0.33
SSR1P43307 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SSR1P43307 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.14■□□□□ 0.33
SSR1P43307 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.14■□□□□ 0.33
SSR1P43307 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSR1P43307 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.14■□□□□ 0.33
SSR1P43307 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.13■□□□□ 0.33
SSR1P43307 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 MIR648-201ENST00000385046 94 ntBASIC17.13■□□□□ 0.33
SSR1P43307 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SSR1P43307 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 RNA5SP416-201ENST00000516838 111 ntBASIC17.13■□□□□ 0.33
SSR1P43307 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.13■□□□□ 0.33
SSR1P43307 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.13■□□□□ 0.33
SSR1P43307 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
SSR1P43307 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SSR1P43307 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.13■□□□□ 0.33
SSR1P43307 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSR1P43307 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SSR1P43307 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SSR1P43307 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SSR1P43307 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SSR1P43307 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.12■□□□□ 0.33
SSR1P43307 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 SLC25A1P1-201ENST00000528351 927 ntBASIC17.12■□□□□ 0.33
SSR1P43307 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SSR1P43307 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.12■□□□□ 0.33
SSR1P43307 AC068137.2-201ENST00000605408 478 ntBASIC17.12■□□□□ 0.33
SSR1P43307 AL513190.1-201ENST00000621254 727 ntBASIC17.12■□□□□ 0.33
SSR1P43307 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.12■□□□□ 0.33
SSR1P43307 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSR1P43307 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms