Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC1A1P43005 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A1P43005 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC1A1P43005 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A1P43005 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A1P43005 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 AC006486.2-201ENST00000624246 2199 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC1A1P43005 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 MCCD1P2-201ENST00000423228 335 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A1P43005 ACTG1P14-201ENST00000446382 1122 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 SPDYE11-202ENST00000450699 704 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 AL109954.1-202ENST00000564051 2148 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 SPDYE9P-201ENST00000570642 692 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC1A1P43005 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A1P43005 SPDYE10P-202ENST00000612005 668 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 SPDYE8P-202ENST00000612377 668 ntBASIC16.77■□□□□ 0.28
SLC1A1P43005 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A1P43005 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC1A1P43005 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC1A1P43005 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A1P43005 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
SLC1A1P43005 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SLC1A1P43005 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 SPCS2P4-201ENST00000436160 681 ntBASIC16.76■□□□□ 0.27
SLC1A1P43005 AL139010.1-201ENST00000454878 894 ntBASIC16.76■□□□□ 0.27
SLC1A1P43005 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC1A1P43005 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC1A1P43005 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC1A1P43005 MIR4313-201ENST00000580760 101 ntBASIC16.76■□□□□ 0.27
SLC1A1P43005 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC1A1P43005 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 AC092127.1-201ENST00000567093 3455 ntBASIC16.76■□□□□ 0.27
SLC1A1P43005 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A1P43005 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A1P43005 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A1P43005 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms