Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.55■□□□□ 0.4
USP8P40818 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP8P40818 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 C8orf49-201ENST00000525043 1968 ntBASIC17.55■□□□□ 0.4
USP8P40818 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
USP8P40818 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.55■□□□□ 0.4
USP8P40818 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
USP8P40818 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.54■□□□□ 0.4
USP8P40818 AC126177.1-201ENST00000547829 2218 ntBASIC17.54■□□□□ 0.4
USP8P40818 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.54■□□□□ 0.4
USP8P40818 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
USP8P40818 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.54■□□□□ 0.4
USP8P40818 PRYP6-201ENST00000514804 343 ntBASIC17.54■□□□□ 0.4
USP8P40818 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.54■□□□□ 0.4
USP8P40818 AC040169.1-201ENST00000565382 521 ntBASIC17.54■□□□□ 0.4
USP8P40818 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 AC099522.2-201ENST00000607001 744 ntBASIC17.54■□□□□ 0.4
USP8P40818 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.54■□□□□ 0.4
USP8P40818 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
USP8P40818 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.54■□□□□ 0.4
USP8P40818 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 AL365203.3-201ENST00000609742 2057 ntBASIC17.54■□□□□ 0.4
USP8P40818 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.54■□□□□ 0.4
USP8P40818 AL161772.1-201ENST00000610494 4412 ntBASIC17.54■□□□□ 0.4
USP8P40818 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP8P40818 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.54■□□□□ 0.4
USP8P40818 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.53■□□□□ 0.4
USP8P40818 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.53■□□□□ 0.4
USP8P40818 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.53■□□□□ 0.4
USP8P40818 AC002347.1-201ENST00000569543 541 ntBASIC17.53■□□□□ 0.4
USP8P40818 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
USP8P40818 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.53■□□□□ 0.4
USP8P40818 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.53■□□□□ 0.4
USP8P40818 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.53■□□□□ 0.4
USP8P40818 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.53■□□□□ 0.4
USP8P40818 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
USP8P40818 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP8P40818 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.53■□□□□ 0.4
USP8P40818 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
USP8P40818 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.52■□□□□ 0.4
USP8P40818 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
USP8P40818 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
USP8P40818 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms