Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V1AP38606 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V1AP38606 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 AP001582.1-201ENST00000525856 295 ntBASIC20.2■□□□□ 0.82
ATP6V1AP38606 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 AL022328.3-201ENST00000607943 679 ntBASIC20.2■□□□□ 0.82
ATP6V1AP38606 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V1AP38606 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V1AP38606 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 AC093813.1-201ENST00000605066 256 ntBASIC20.19■□□□□ 0.82
ATP6V1AP38606 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.19■□□□□ 0.82
ATP6V1AP38606 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP6V1AP38606 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V1AP38606 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 AC006001.1-201ENST00000325130 474 ntBASIC20.18■□□□□ 0.82
ATP6V1AP38606 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 AC104306.2-201ENST00000451877 341 ntBASIC20.18■□□□□ 0.82
ATP6V1AP38606 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 AP001258.2-201ENST00000529891 490 ntBASIC20.18■□□□□ 0.82
ATP6V1AP38606 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ATP6V1AP38606 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V1AP38606 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.18■□□□□ 0.82
ATP6V1AP38606 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V1AP38606 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP6V1AP38606 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP6V1AP38606 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V1AP38606 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V1AP38606 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V1AP38606 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms