Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.94■□□□□ 0.3
PCK1P35558 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.94■□□□□ 0.3
PCK1P35558 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.94■□□□□ 0.3
PCK1P35558 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.94■□□□□ 0.3
PCK1P35558 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.94■□□□□ 0.3
PCK1P35558 AC026120.1-201ENST00000611536 926 ntBASIC16.94■□□□□ 0.3
PCK1P35558 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCK1P35558 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.94■□□□□ 0.3
PCK1P35558 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCK1P35558 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCK1P35558 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.94■□□□□ 0.3
PCK1P35558 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCK1P35558 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCK1P35558 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCK1P35558 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCK1P35558 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PCK1P35558 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.94■□□□□ 0.3
PCK1P35558 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.94■□□□□ 0.3
PCK1P35558 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCK1P35558 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PCK1P35558 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.94■□□□□ 0.3
PCK1P35558 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCK1P35558 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCK1P35558 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.94■□□□□ 0.3
PCK1P35558 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.93■□□□□ 0.3
PCK1P35558 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.93■□□□□ 0.3
PCK1P35558 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 MIR346-201ENST00000362234 95 ntBASIC16.93■□□□□ 0.3
PCK1P35558 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.93■□□□□ 0.3
PCK1P35558 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.93■□□□□ 0.3
PCK1P35558 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.93■□□□□ 0.3
PCK1P35558 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 LINC01225-203ENST00000563550 1244 ntBASIC16.93■□□□□ 0.3
PCK1P35558 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCK1P35558 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCK1P35558 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.93■□□□□ 0.3
PCK1P35558 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.92■□□□□ 0.3
PCK1P35558 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCK1P35558 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 AP005117.1-202ENST00000581724 1908 ntBASIC16.92■□□□□ 0.3
PCK1P35558 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCK1P35558 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PCK1P35558 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCK1P35558 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCK1P35558 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCK1P35558 HTR5BP-201ENST00000430851 1154 ntBASIC16.92■□□□□ 0.3
PCK1P35558 SPDYE11-202ENST00000450699 704 ntBASIC16.92■□□□□ 0.3
PCK1P35558 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.92■□□□□ 0.3
PCK1P35558 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.92■□□□□ 0.3
PCK1P35558 KRT8P23-201ENST00000560090 1207 ntBASIC16.92■□□□□ 0.3
PCK1P35558 SPDYE9P-201ENST00000570642 692 ntBASIC16.92■□□□□ 0.3
PCK1P35558 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.92■□□□□ 0.3
PCK1P35558 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms