Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN1P35523 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCN1P35523 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN1P35523 NCF1C-201ENST00000438382 1427 ntBASIC18.3■□□□□ 0.52
CLCN1P35523 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN1P35523 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCN1P35523 AC148477.4-201ENST00000613430 1793 ntBASIC18.3■□□□□ 0.52
CLCN1P35523 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN1P35523 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLCN1P35523 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 AP002414.1-201ENST00000391405 1147 ntBASIC18.29■□□□□ 0.52
CLCN1P35523 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCN1P35523 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLCN1P35523 SAPCD2P3-201ENST00000455031 850 ntBASIC18.29■□□□□ 0.52
CLCN1P35523 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN1P35523 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCN1P35523 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCN1P35523 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN1P35523 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLCN1P35523 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCN1P35523 MTDHP4-201ENST00000600287 670 ntBASIC18.29■□□□□ 0.52
CLCN1P35523 IFNL4P1-201ENST00000607083 540 ntBASIC18.29■□□□□ 0.52
CLCN1P35523 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLCN1P35523 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCN1P35523 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN1P35523 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCN1P35523 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCN1P35523 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCN1P35523 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CLCN1P35523 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCN1P35523 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
CLCN1P35523 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCN1P35523 AL589182.2-201ENST00000619332 1049 ntBASIC18.28■□□□□ 0.52
CLCN1P35523 AL139011.1-202ENST00000642063 584 ntBASIC18.28■□□□□ 0.52
CLCN1P35523 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCN1P35523 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CLCN1P35523 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCN1P35523 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLCN1P35523 AL928921.2-201ENST00000641325 2442 ntBASIC18.28■□□□□ 0.52
CLCN1P35523 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
CLCN1P35523 GALC-206ENST00000544807 2528 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN1P35523 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN1P35523 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN1P35523 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN1P35523 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCN1P35523 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.27■□□□□ 0.52
CLCN1P35523 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms