Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARSP26640 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
VARSP26640 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
VARSP26640 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.83■□□□□ 0.13
VARSP26640 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
VARSP26640 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
VARSP26640 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VARSP26640 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
VARSP26640 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
VARSP26640 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.83■□□□□ 0.12
VARSP26640 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
VARSP26640 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VARSP26640 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VARSP26640 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.83■□□□□ 0.12
VARSP26640 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.83■□□□□ 0.12
VARSP26640 SPCS2P1-201ENST00000561636 679 ntBASIC15.83■□□□□ 0.12
VARSP26640 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.83■□□□□ 0.12
VARSP26640 AC239800.4-201ENST00000603712 296 ntBASIC15.83■□□□□ 0.12
VARSP26640 AL096865.1-201ENST00000606796 927 ntBASIC15.83■□□□□ 0.12
VARSP26640 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.83■□□□□ 0.12
VARSP26640 AC092902.6-201ENST00000641783 218 ntBASIC15.83■□□□□ 0.12
VARSP26640 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.83■□□□□ 0.12
VARSP26640 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
VARSP26640 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VARSP26640 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.83■□□□□ 0.12
VARSP26640 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.83■□□□□ 0.12
VARSP26640 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.83■□□□□ 0.12
VARSP26640 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.83■□□□□ 0.12
VARSP26640 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.83■□□□□ 0.12
VARSP26640 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARSP26640 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.82■□□□□ 0.12
VARSP26640 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.82■□□□□ 0.12
VARSP26640 AC093724.1-201ENST00000448659 1027 ntBASIC15.82■□□□□ 0.12
VARSP26640 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.82■□□□□ 0.12
VARSP26640 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.82■□□□□ 0.12
VARSP26640 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 AC005786.4-201ENST00000623369 682 ntBASIC15.82■□□□□ 0.12
VARSP26640 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.82■□□□□ 0.12
VARSP26640 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.82■□□□□ 0.12
VARSP26640 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 AC073439.1-201ENST00000624121 1774 ntBASIC15.82■□□□□ 0.12
VARSP26640 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.82■□□□□ 0.12
VARSP26640 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.82■□□□□ 0.12
VARSP26640 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARSP26640 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms