Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFRSF1BP20333 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AC025580.3-201ENST00000617932 1424 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AC004870.1-201ENST00000315132 882 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 IGHV3-22-201ENST00000520721 359 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AC002347.1-201ENST00000569543 541 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 MIR4321-201ENST00000592276 80 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AC023141.13-201ENST00000604991 943 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AL365330.1-201ENST00000607459 531 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TNFRSF1BP20333 BCAR1-209ENST00000546196 1340 ntBASIC14.92□□□□□ -0.02
TNFRSF1BP20333 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 PKD1P5-201ENST00000532415 10291 ntBASIC14.91□□□□□ -0.02
TNFRSF1BP20333 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 AC140658.5-201ENST00000438532 169 ntBASIC14.91□□□□□ -0.02
TNFRSF1BP20333 AC245100.5-201ENST00000452108 331 ntBASIC14.91□□□□□ -0.02
TNFRSF1BP20333 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 424.5 ms