Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 AC134407.2-201ENST00000625089 1978 ntBASIC21.05■□□□□ 0.96
CSB-PGBD3P0DP91 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 AL450472.2-201ENST00000603663 1156 ntBASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 AL118558.3-201ENST00000607414 1079 ntBASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSB-PGBD3P0DP91 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 ZNF767P-206ENST00000513792 565 ntBASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 C2orf69P2-201ENST00000562032 1123 ntBASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 AC008687.7-202ENST00000637404 953 ntBASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 REXO1L1P-202ENST00000608646 1974 ntBASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSB-PGBD3P0DP91 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.02■□□□□ 0.96
CSB-PGBD3P0DP91 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms