Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN1P07384 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CAPN1P07384 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CAPN1P07384 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN1P07384 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN1P07384 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.84■□□□□ 0.13
CAPN1P07384 FAM58DP-201ENST00000428076 619 ntBASIC15.84■□□□□ 0.13
CAPN1P07384 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.84■□□□□ 0.13
CAPN1P07384 AL592309.1-201ENST00000443127 649 ntBASIC15.84■□□□□ 0.13
CAPN1P07384 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CAPN1P07384 RN7SL589P-201ENST00000481268 310 ntBASIC15.84■□□□□ 0.13
CAPN1P07384 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.84■□□□□ 0.13
CAPN1P07384 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN1P07384 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CAPN1P07384 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.84■□□□□ 0.13
CAPN1P07384 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.84■□□□□ 0.13
CAPN1P07384 LINC01225-203ENST00000563550 1244 ntBASIC15.84■□□□□ 0.13
CAPN1P07384 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.84■□□□□ 0.13
CAPN1P07384 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 AL161645.1-201ENST00000622716 1255 ntBASIC15.84■□□□□ 0.13
CAPN1P07384 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CAPN1P07384 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN1P07384 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN1P07384 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CAPN1P07384 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CAPN1P07384 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CAPN1P07384 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CAPN1P07384 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CAPN1P07384 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.83■□□□□ 0.13
CAPN1P07384 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.83■□□□□ 0.13
CAPN1P07384 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.83■□□□□ 0.13
CAPN1P07384 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CAPN1P07384 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CAPN1P07384 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN1P07384 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN1P07384 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 SPCS2P4-201ENST00000436160 681 ntBASIC15.83■□□□□ 0.12
CAPN1P07384 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 AC069335.1-201ENST00000489972 472 ntBASIC15.83■□□□□ 0.12
CAPN1P07384 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN1P07384 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.83■□□□□ 0.12
CAPN1P07384 AC025678.2-201ENST00000562061 970 ntBASIC15.83■□□□□ 0.12
CAPN1P07384 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.83■□□□□ 0.12
CAPN1P07384 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.83■□□□□ 0.12
CAPN1P07384 LINC02084-201ENST00000606069 1096 ntBASIC15.83■□□□□ 0.12
CAPN1P07384 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN1P07384 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CAPN1P07384 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CAPN1P07384 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.83■□□□□ 0.12
CAPN1P07384 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN1P07384 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms