Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL5A2P05997 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL5A2P05997 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.63■□□□□ 0.89
COL5A2P05997 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL5A2P05997 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.63■□□□□ 0.89
COL5A2P05997 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL5A2P05997 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COL5A2P05997 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
COL5A2P05997 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 AC005730.2-201ENST00000564549 1184 ntBASIC20.62■□□□□ 0.89
COL5A2P05997 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.62■□□□□ 0.89
COL5A2P05997 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.62■□□□□ 0.89
COL5A2P05997 U62317.3-201ENST00000608319 855 ntBASIC20.62■□□□□ 0.89
COL5A2P05997 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
COL5A2P05997 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
COL5A2P05997 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.62■□□□□ 0.89
COL5A2P05997 AC104457.1-201ENST00000401024 814 ntBASIC20.62■□□□□ 0.89
COL5A2P05997 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COL5A2P05997 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.62■□□□□ 0.89
COL5A2P05997 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.62■□□□□ 0.89
COL5A2P05997 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC20.62■□□□□ 0.89
COL5A2P05997 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
COL5A2P05997 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.62■□□□□ 0.89
COL5A2P05997 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL5A2P05997 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.62■□□□□ 0.89
COL5A2P05997 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.62■□□□□ 0.89
COL5A2P05997 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.62■□□□□ 0.89
COL5A2P05997 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COL5A2P05997 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COL5A2P05997 AC073413.1-201ENST00000603927 732 ntBASIC20.62■□□□□ 0.89
COL5A2P05997 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COL5A2P05997 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL5A2P05997 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.62■□□□□ 0.89
COL5A2P05997 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.61■□□□□ 0.89
COL5A2P05997 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL5A2P05997 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.61■□□□□ 0.89
COL5A2P05997 RN7SL720P-201ENST00000488178 304 ntBASIC20.61■□□□□ 0.89
COL5A2P05997 AC245884.6-201ENST00000515672 1067 ntBASIC20.61■□□□□ 0.89
COL5A2P05997 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COL5A2P05997 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.61■□□□□ 0.89
COL5A2P05997 ENPP7P14-201ENST00000621765 1040 ntBASIC20.61■□□□□ 0.89
COL5A2P05997 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.61■□□□□ 0.89
COL5A2P05997 PRSS30P-206ENST00000641773 873 ntBASIC20.61■□□□□ 0.89
COL5A2P05997 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.61■□□□□ 0.89
COL5A2P05997 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL5A2P05997 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL5A2P05997 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.6■□□□□ 0.89
COL5A2P05997 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL5A2P05997 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL5A2P05997 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.6■□□□□ 0.89
COL5A2P05997 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.6■□□□□ 0.89
COL5A2P05997 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.6■□□□□ 0.89
COL5A2P05997 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.6■□□□□ 0.89
COL5A2P05997 FTLP10-202ENST00000505798 471 ntBASIC20.6■□□□□ 0.89
COL5A2P05997 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
COL5A2P05997 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC20.6■□□□□ 0.89
COL5A2P05997 AC007663.3-201ENST00000609632 465 ntBASIC20.6■□□□□ 0.89
COL5A2P05997 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
COL5A2P05997 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.6■□□□□ 0.89
COL5A2P05997 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.6■□□□□ 0.89
COL5A2P05997 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL5A2P05997 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL5A2P05997 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.6■□□□□ 0.89
COL5A2P05997 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.6■□□□□ 0.89
COL5A2P05997 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL5A2P05997 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL5A2P05997 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.6■□□□□ 0.89
COL5A2P05997 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL5A2P05997 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL5A2P05997 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.59■□□□□ 0.89
COL5A2P05997 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL5A2P05997 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms