Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ERBB2P04626 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 PHKG1P2-201ENST00000457537 863 ntBASIC16.8■□□□□ 0.28
ERBB2P04626 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 HNRNPUP1-201ENST00000554987 333 ntBASIC16.8■□□□□ 0.28
ERBB2P04626 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ERBB2P04626 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.8■□□□□ 0.28
ERBB2P04626 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ERBB2P04626 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.8■□□□□ 0.28
ERBB2P04626 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.8■□□□□ 0.28
ERBB2P04626 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERBB2P04626 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ERBB2P04626 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.79■□□□□ 0.28
ERBB2P04626 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.79■□□□□ 0.28
ERBB2P04626 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.79■□□□□ 0.28
ERBB2P04626 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ERBB2P04626 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 AC092183.1-201ENST00000469884 875 ntBASIC16.79■□□□□ 0.28
ERBB2P04626 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 AL138828.2-201ENST00000615812 383 ntBASIC16.79■□□□□ 0.28
ERBB2P04626 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.79■□□□□ 0.28
ERBB2P04626 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERBB2P04626 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.79■□□□□ 0.28
ERBB2P04626 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ERBB2P04626 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ERBB2P04626 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
ERBB2P04626 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.78■□□□□ 0.28
ERBB2P04626 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 AC092850.2-201ENST00000623821 2697 ntBASIC16.78■□□□□ 0.28
ERBB2P04626 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ERBB2P04626 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.78■□□□□ 0.28
ERBB2P04626 AC107890.1-201ENST00000422478 521 ntBASIC16.78■□□□□ 0.28
ERBB2P04626 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.78■□□□□ 0.28
ERBB2P04626 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.78■□□□□ 0.28
ERBB2P04626 FAM86GP-201ENST00000448322 971 ntBASIC16.78■□□□□ 0.28
ERBB2P04626 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.78■□□□□ 0.28
ERBB2P04626 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.78■□□□□ 0.28
ERBB2P04626 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.78■□□□□ 0.28
ERBB2P04626 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 AC097359.3-201ENST00000603982 1210 ntBASIC16.78■□□□□ 0.28
ERBB2P04626 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.78■□□□□ 0.28
ERBB2P04626 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms