Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.47□□□□□ -0.25
SIX6O95475 AL020989.1-201ENST00000422979 469 ntBASIC13.47□□□□□ -0.25
SIX6O95475 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.47□□□□□ -0.25
SIX6O95475 VENTXP5-201ENST00000523979 775 ntBASIC13.47□□□□□ -0.25
SIX6O95475 AL353801.3-201ENST00000609898 542 ntBASIC13.47□□□□□ -0.25
SIX6O95475 AL138966.2-201ENST00000621997 464 ntBASIC13.47□□□□□ -0.25
SIX6O95475 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.47□□□□□ -0.25
SIX6O95475 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.47□□□□□ -0.25
SIX6O95475 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 COL6A4P2-202ENST00000504443 2753 ntBASIC13.47□□□□□ -0.25
SIX6O95475 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.47□□□□□ -0.25
SIX6O95475 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SIX6O95475 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SIX6O95475 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
SIX6O95475 MROH4P-201ENST00000431302 1578 ntBASIC13.46□□□□□ -0.25
SIX6O95475 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.46□□□□□ -0.25
SIX6O95475 AL590787.1-201ENST00000568856 1315 ntBASIC13.46□□□□□ -0.25
SIX6O95475 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
SIX6O95475 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SIX6O95475 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.46□□□□□ -0.25
SIX6O95475 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.46□□□□□ -0.25
SIX6O95475 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.46□□□□□ -0.25
SIX6O95475 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.46□□□□□ -0.25
SIX6O95475 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.46□□□□□ -0.25
SIX6O95475 RN7SL606P-201ENST00000472779 293 ntBASIC13.46□□□□□ -0.25
SIX6O95475 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.46□□□□□ -0.25
SIX6O95475 LINC01238-205ENST00000567549 1107 ntBASIC13.46□□□□□ -0.25
SIX6O95475 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.46□□□□□ -0.25
SIX6O95475 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.46□□□□□ -0.25
SIX6O95475 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SIX6O95475 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SIX6O95475 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SIX6O95475 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SIX6O95475 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.46□□□□□ -0.26
SIX6O95475 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SIX6O95475 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.46□□□□□ -0.26
SIX6O95475 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SIX6O95475 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
SIX6O95475 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 AC131009.4-201ENST00000624048 1740 ntBASIC13.45□□□□□ -0.26
SIX6O95475 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms