Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
KDM4BO94953 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.18□□□□□ -0.14
KDM4BO94953 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KDM4BO94953 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KDM4BO94953 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KDM4BO94953 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.18□□□□□ -0.14
KDM4BO94953 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KDM4BO94953 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KDM4BO94953 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.17□□□□□ -0.14
KDM4BO94953 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
KDM4BO94953 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
KDM4BO94953 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KDM4BO94953 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.17□□□□□ -0.14
KDM4BO94953 HCG4-201ENST00000418983 998 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.17□□□□□ -0.14
KDM4BO94953 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.17□□□□□ -0.14
KDM4BO94953 KRT18P56-201ENST00000507275 550 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 RNPS1P1-201ENST00000507437 918 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 IGHV3-65-201ENST00000523210 341 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 AC087641.1-201ENST00000557561 1021 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.17□□□□□ -0.14
KDM4BO94953 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 MIR1199-201ENST00000621445 119 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 AC008735.5-201ENST00000623544 497 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 AC139749.1-202ENST00000617529 3139 ntBASIC14.17□□□□□ -0.14
KDM4BO94953 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
KDM4BO94953 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KDM4BO94953 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDM4BO94953 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.17□□□□□ -0.14
KDM4BO94953 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KDM4BO94953 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 UNC93B7-201ENST00000509439 705 ntBASIC14.16□□□□□ -0.14
KDM4BO94953 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.16□□□□□ -0.14
KDM4BO94953 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.16□□□□□ -0.14
KDM4BO94953 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.16□□□□□ -0.14
KDM4BO94953 AC020765.3-201ENST00000613051 740 ntBASIC14.16□□□□□ -0.14
KDM4BO94953 AC010654.1-201ENST00000615722 808 ntBASIC14.16□□□□□ -0.14
KDM4BO94953 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 PGM5P2-202ENST00000637225 1043 ntBASIC14.16□□□□□ -0.14
KDM4BO94953 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.16□□□□□ -0.14
KDM4BO94953 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDM4BO94953 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KDM4BO94953 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms