Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.97■□□□□ 0.47
ACTN4O43707 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 ACTG1P14-201ENST00000446382 1122 ntBASIC17.96■□□□□ 0.47
ACTN4O43707 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ACTN4O43707 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.96■□□□□ 0.47
ACTN4O43707 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 SLC25A39P2-201ENST00000537614 270 ntBASIC17.96■□□□□ 0.47
ACTN4O43707 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.96■□□□□ 0.47
ACTN4O43707 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ACTN4O43707 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACTN4O43707 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ACTN4O43707 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.96■□□□□ 0.47
ACTN4O43707 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.96■□□□□ 0.46
ACTN4O43707 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ACTN4O43707 CYP4F24P-201ENST00000586049 1580 ntBASIC17.96■□□□□ 0.46
ACTN4O43707 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
ACTN4O43707 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ACTN4O43707 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.95■□□□□ 0.46
ACTN4O43707 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
ACTN4O43707 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.95■□□□□ 0.46
ACTN4O43707 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.95■□□□□ 0.46
ACTN4O43707 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ACTN4O43707 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 HTR5BP-201ENST00000430851 1154 ntBASIC17.95■□□□□ 0.46
ACTN4O43707 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.95■□□□□ 0.46
ACTN4O43707 MKNK2P1-201ENST00000437526 628 ntBASIC17.95■□□□□ 0.46
ACTN4O43707 EEF1DP4-201ENST00000446006 880 ntBASIC17.95■□□□□ 0.46
ACTN4O43707 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.95■□□□□ 0.46
ACTN4O43707 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.95■□□□□ 0.46
ACTN4O43707 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ACTN4O43707 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ACTN4O43707 AP3S2-216ENST00000617003 1561 ntBASIC17.95■□□□□ 0.46
ACTN4O43707 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.95■□□□□ 0.46
ACTN4O43707 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.95■□□□□ 0.46
ACTN4O43707 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ACTN4O43707 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACTN4O43707 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms