Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PHGDHO43175 AL136379.1-201ENST00000623471 2642 ntBASIC15.98■□□□□ 0.15
PHGDHO43175 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PHGDHO43175 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 AP001282.1-201ENST00000531301 1499 ntBASIC15.98■□□□□ 0.15
PHGDHO43175 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PHGDHO43175 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PHGDHO43175 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
PHGDHO43175 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.98■□□□□ 0.15
PHGDHO43175 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
PHGDHO43175 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PHGDHO43175 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.98■□□□□ 0.15
PHGDHO43175 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.98■□□□□ 0.15
PHGDHO43175 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.98■□□□□ 0.15
PHGDHO43175 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PHGDHO43175 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PHGDHO43175 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PHGDHO43175 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PHGDHO43175 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PHGDHO43175 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PHGDHO43175 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.97■□□□□ 0.15
PHGDHO43175 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PHGDHO43175 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.97■□□□□ 0.15
PHGDHO43175 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 AC112191.1-201ENST00000523689 701 ntBASIC15.97■□□□□ 0.15
PHGDHO43175 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.97■□□□□ 0.15
PHGDHO43175 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 RARRES2P8-201ENST00000566335 367 ntBASIC15.97■□□□□ 0.15
PHGDHO43175 AC140113.2-201ENST00000604370 208 ntBASIC15.97■□□□□ 0.15
PHGDHO43175 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PHGDHO43175 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.97■□□□□ 0.15
PHGDHO43175 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.97■□□□□ 0.15
PHGDHO43175 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 ZNF259P1-201ENST00000407656 1365 ntBASIC15.97■□□□□ 0.15
PHGDHO43175 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.97■□□□□ 0.15
PHGDHO43175 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHGDHO43175 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.96■□□□□ 0.15
PHGDHO43175 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PHGDHO43175 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
PHGDHO43175 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PHGDHO43175 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHGDHO43175 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.96■□□□□ 0.15
PHGDHO43175 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.96■□□□□ 0.15
PHGDHO43175 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms