Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CHD2O14647 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.71■■□□□ 1.07
CHD2O14647 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD2O14647 TPM3P8-201ENST00000330554 643 ntBASIC21.71■■□□□ 1.07
CHD2O14647 AL627389.1-201ENST00000413508 1182 ntBASIC21.71■■□□□ 1.07
CHD2O14647 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.71■■□□□ 1.07
CHD2O14647 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD2O14647 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CHD2O14647 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD2O14647 CEP164P1-201ENST00000455142 418 ntBASIC21.7■■□□□ 1.06
CHD2O14647 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC21.7■■□□□ 1.06
CHD2O14647 AL161670.2-201ENST00000557650 1227 ntBASIC21.7■■□□□ 1.06
CHD2O14647 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21.7■■□□□ 1.06
CHD2O14647 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CHD2O14647 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD2O14647 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHD2O14647 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHD2O14647 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHD2O14647 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD2O14647 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CHD2O14647 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 DPM3-202ENST00000368399 517 ntBASIC21.69■■□□□ 1.06
CHD2O14647 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC21.69■■□□□ 1.06
CHD2O14647 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC21.69■■□□□ 1.06
CHD2O14647 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 CSH2-206ENST00000560142 749 ntTSL 5 BASIC21.69■■□□□ 1.06
CHD2O14647 AC100757.4-201ENST00000626934 759 ntBASIC21.69■■□□□ 1.06
CHD2O14647 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC21.69■■□□□ 1.06
CHD2O14647 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CHD2O14647 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHD2O14647 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHD2O14647 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.69■■□□□ 1.06
CHD2O14647 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CHD2O14647 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD2O14647 AL136309.1-201ENST00000403917 691 ntBASIC21.69■■□□□ 1.06
CHD2O14647 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC21.69■■□□□ 1.06
CHD2O14647 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC21.69■■□□□ 1.06
CHD2O14647 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHD2O14647 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.68■■□□□ 1.06
CHD2O14647 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 FLII-221ENST00000578558 2377 ntTSL 5 BASIC21.68■■□□□ 1.06
CHD2O14647 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
CHD2O14647 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CHD2O14647 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.68■■□□□ 1.06
CHD2O14647 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC21.68■■□□□ 1.06
CHD2O14647 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.68■■□□□ 1.06
CHD2O14647 MIR4750-201ENST00000584564 56 ntBASIC21.68■■□□□ 1.06
CHD2O14647 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC21.68■■□□□ 1.06
CHD2O14647 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC21.68■■□□□ 1.06
CHD2O14647 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CHD2O14647 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD2O14647 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC21.67■■□□□ 1.06
CHD2O14647 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CHD2O14647 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.67■■□□□ 1.06
CHD2O14647 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD2O14647 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD2O14647 LSM5-207ENST00000410044 687 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD2O14647 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD2O14647 CHMP1AP1-201ENST00000445563 662 ntBASIC21.67■■□□□ 1.06
CHD2O14647 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC21.67■■□□□ 1.06
CHD2O14647 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD2O14647 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.67■■□□□ 1.06
CHD2O14647 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD2O14647 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD2O14647 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.67■■□□□ 1.06
CHD2O14647 OR10B1P-201ENST00000601666 907 ntBASIC21.67■■□□□ 1.06
CHD2O14647 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD2O14647 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD2O14647 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD2O14647 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD2O14647 MFF-204ENST00000353339 2186 ntTSL 5 BASIC21.67■■□□□ 1.06
CHD2O14647 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms