Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC012362.1-201ENST00000434906 739 ntBASIC26.78■■□□□ 1.88
CUX2O14529 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC26.78■■□□□ 1.88
CUX2O14529 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC26.78■■□□□ 1.88
CUX2O14529 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CUX2O14529 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC26.78■■□□□ 1.88
CUX2O14529 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC26.78■■□□□ 1.88
CUX2O14529 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CUX2O14529 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CUX2O14529 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC26.78■■□□□ 1.88
CUX2O14529 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC26.78■■□□□ 1.88
CUX2O14529 AC074138.1-201ENST00000611182 1303 ntBASIC26.78■■□□□ 1.88
CUX2O14529 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CUX2O14529 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CUX2O14529 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CUX2O14529 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CUX2O14529 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CUX2O14529 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CUX2O14529 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC26.77■■□□□ 1.88
CUX2O14529 RPS9P1-201ENST00000419943 583 ntBASIC26.77■■□□□ 1.88
CUX2O14529 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CUX2O14529 C2orf69P1-201ENST00000563532 1093 ntBASIC26.77■■□□□ 1.88
CUX2O14529 SAMD11P1-201ENST00000571429 661 ntBASIC26.77■■□□□ 1.88
CUX2O14529 AL023803.2-201ENST00000620080 638 ntBASIC26.77■■□□□ 1.88
CUX2O14529 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CUX2O14529 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CUX2O14529 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
CUX2O14529 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC26.77■■□□□ 1.88
CUX2O14529 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CUX2O14529 GGT3P-204ENST00000453783 1664 ntBASIC26.77■■□□□ 1.88
CUX2O14529 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC26.77■■□□□ 1.88
CUX2O14529 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CUX2O14529 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
CUX2O14529 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC26.76■■□□□ 1.87
CUX2O14529 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC26.76■■□□□ 1.87
CUX2O14529 PSMD4P1-201ENST00000433951 1109 ntBASIC26.76■■□□□ 1.87
CUX2O14529 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC26.76■■□□□ 1.87
CUX2O14529 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC26.76■■□□□ 1.87
CUX2O14529 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC26.76■■□□□ 1.87
CUX2O14529 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC26.76■■□□□ 1.87
CUX2O14529 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC26.76■■□□□ 1.87
CUX2O14529 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC26.76■■□□□ 1.87
CUX2O14529 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CUX2O14529 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CUX2O14529 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CUX2O14529 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CUX2O14529 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CUX2O14529 AL357373.1-201ENST00000394974 322 ntBASIC26.75■■□□□ 1.87
CUX2O14529 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CUX2O14529 PFN2-206ENST00000461930 606 ntTSL 4 BASIC26.75■■□□□ 1.87
CUX2O14529 KRT18P43-201ENST00000469825 1281 ntBASIC26.75■■□□□ 1.87
CUX2O14529 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC26.75■■□□□ 1.87
CUX2O14529 AC244250.3-201ENST00000620749 366 ntBASIC26.75■■□□□ 1.87
CUX2O14529 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
CUX2O14529 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC26.75■■□□□ 1.87
CUX2O14529 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
CUX2O14529 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
CUX2O14529 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CUX2O14529 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CUX2O14529 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC26.74■■□□□ 1.87
CUX2O14529 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 AC027139.1-201ENST00000565286 951 ntBASIC26.74■■□□□ 1.87
CUX2O14529 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CUX2O14529 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
CUX2O14529 RPS15-201ENST00000233609 534 ntTSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 NPPA-201ENST00000376476 728 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 AC079112.1-201ENST00000454972 939 ntBASIC26.74■■□□□ 1.87
CUX2O14529 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
CUX2O14529 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC26.74■■□□□ 1.87
CUX2O14529 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 RPS15-202ENST00000585665 467 ntTSL 3 BASIC26.74■■□□□ 1.87
CUX2O14529 RPS15-205ENST00000586686 562 ntTSL 5 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms