Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AP001282.1-201ENST00000531301 1499 ntBASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 AC068587.6-202ENST00000641839 5619 ntBASIC19.65■□□□□ 0.74
TRIM6-TRIM34B2RNG4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM6-TRIM34B2RNG4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM6-TRIM34B2RNG4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM6-TRIM34B2RNG4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM6-TRIM34B2RNG4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
TRIM6-TRIM34B2RNG4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 RARRES2P9-201ENST00000565168 469 ntBASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM6-TRIM34B2RNG4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AL691432.1-201ENST00000596308 1422 ntBASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 MIR1233-2-201ENST00000408138 82 ntBASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 MIR1233-1-201ENST00000408722 82 ntBASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 RBPMS2P1-201ENST00000437762 623 ntBASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 ALG1L8P-201ENST00000533887 760 ntBASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AC134684.3-201ENST00000641758 218 ntBASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
TRIM6-TRIM34B2RNG4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 AL136982.4-201ENST00000437689 1740 ntBASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TRIM6-TRIM34B2RNG4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms