Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 MIR4321-201ENST00000592276 80 ntBASIC16.32■□□□□ 0.2
CAPN8A6NHC0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 AC027307.3-201ENST00000594262 1100 ntBASIC16.32■□□□□ 0.2
CAPN8A6NHC0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN8A6NHC0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 AC126177.1-201ENST00000547829 2218 ntBASIC16.31■□□□□ 0.2
CAPN8A6NHC0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 AC245100.5-201ENST00000452108 331 ntBASIC16.31■□□□□ 0.2
CAPN8A6NHC0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 AL008721.1-201ENST00000609964 604 ntBASIC16.31■□□□□ 0.2
CAPN8A6NHC0 MIR6080-201ENST00000617359 66 ntBASIC16.31■□□□□ 0.2
CAPN8A6NHC0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN8A6NHC0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 SPDYE7P-202ENST00000420373 878 ntBASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AC015911.4-201ENST00000588022 1070 ntBASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AC018529.1-201ENST00000613063 361 ntBASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms