Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC78A2IDD5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 AKAP8P1-201ENST00000434743 1349 ntBASIC16.29■□□□□ 0.2
CCDC78A2IDD5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 BX842568.4-201ENST00000421222 227 ntBASIC16.29■□□□□ 0.2
CCDC78A2IDD5 DNAJB3-201ENST00000446806 729 ntBASIC16.29■□□□□ 0.2
CCDC78A2IDD5 CEND1P1-201ENST00000451006 455 ntBASIC16.29■□□□□ 0.2
CCDC78A2IDD5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.29■□□□□ 0.2
CCDC78A2IDD5 CICP13-201ENST00000422015 2789 ntBASIC16.29■□□□□ 0.2
CCDC78A2IDD5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC78A2IDD5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 AC105233.2-201ENST00000523697 349 ntBASIC16.28■□□□□ 0.2
CCDC78A2IDD5 AF228730.5-201ENST00000530288 346 ntBASIC16.28■□□□□ 0.2
CCDC78A2IDD5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 SPTSSB-204ENST00000617024 1292 ntBASIC16.28■□□□□ 0.2
CCDC78A2IDD5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 AC008677.1-201ENST00000519230 1561 ntBASIC16.28■□□□□ 0.2
CCDC78A2IDD5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 UXT-AS1-201ENST00000590504 1525 ntBASIC16.28■□□□□ 0.2
CCDC78A2IDD5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 AC126755.1-201ENST00000525846 6405 ntBASIC16.28■□□□□ 0.2
CCDC78A2IDD5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC78A2IDD5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC78A2IDD5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC78A2IDD5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC78A2IDD5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC78A2IDD5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC78A2IDD5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC78A2IDD5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms