Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 HAUS4P1-201ENST00000406739 1145 ntBASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 MIR1909-201ENST00000411312 80 ntBASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 AD000864.1-201ENST00000624076 2295 ntBASIC17.07■□□□□ 0.32
PRG3Q9Y2Y8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AC007389.4-201ENST00000454674 793 ntBASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRG3Q9Y2Y8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRG3Q9Y2Y8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms