Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 OR7E14P-202ENST00000530490 1290 ntBASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 ACTL9-202ENST00000612068 1252 ntBASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 AC093458.2-201ENST00000623150 629 ntBASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2D4Q9Y2X8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 CICP24-201ENST00000605464 2705 ntBASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2D4Q9Y2X8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 AC092127.1-201ENST00000567093 3455 ntBASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 FAM185BP-201ENST00000443595 716 ntBASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 AL645728.2-201ENST00000641974 660 ntBASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 LINC01101-201ENST00000622953 1884 ntBASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2D4Q9Y2X8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 AC112693.3-201ENST00000624819 1983 ntBASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2D4Q9Y2X8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms