Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCDNQ9UBB6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 C2orf27AP3-201ENST00000434123 579 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 AC244669.2-201ENST00000612320 853 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 AL354718.3-201ENST00000616414 581 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 CR382287.1-201ENST00000623954 586 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 TUBB8P12-201ENST00000308911 1335 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 TUBB7P-202ENST00000428444 1305 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 TUBB8P7-204ENST00000567960 1332 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 AC134312.5-201ENST00000568031 1313 ntBASIC15.85■□□□□ 0.13
NCDNQ9UBB6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NCDNQ9UBB6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 AC005077.2-201ENST00000449786 690 ntBASIC15.84■□□□□ 0.13
NCDNQ9UBB6 RPL13AP25-201ENST00000484130 612 ntBASIC15.84■□□□□ 0.13
NCDNQ9UBB6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 KRT90P-201ENST00000549264 1064 ntBASIC15.84■□□□□ 0.13
NCDNQ9UBB6 AC105129.2-201ENST00000559536 390 ntBASIC15.84■□□□□ 0.13
NCDNQ9UBB6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 BRI3BPP1-201ENST00000594224 787 ntBASIC15.84■□□□□ 0.13
NCDNQ9UBB6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 KRT8P39-201ENST00000396270 1433 ntBASIC15.84■□□□□ 0.13
NCDNQ9UBB6 AC016396.2-201ENST00000562575 1417 ntBASIC15.84■□□□□ 0.13
NCDNQ9UBB6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.84■□□□□ 0.13
NCDNQ9UBB6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.83■□□□□ 0.13
NCDNQ9UBB6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NCDNQ9UBB6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NCDNQ9UBB6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
NCDNQ9UBB6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
NCDNQ9UBB6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCDNQ9UBB6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCDNQ9UBB6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCDNQ9UBB6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCDNQ9UBB6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCDNQ9UBB6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCDNQ9UBB6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms