Protein–RNA interactions for Protein: Q9NZC3

GDE1, Glycerophosphodiester phosphodiesterase 1, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1Q9NZC3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AC022137.2-201ENST00000503482 481 ntBASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AC106760.1-201ENST00000508690 800 ntBASIC16.3■□□□□ 0.2
GDE1Q9NZC3 KRT90P-201ENST00000549264 1064 ntBASIC16.3■□□□□ 0.2
GDE1Q9NZC3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AC010328.2-201ENST00000597698 1111 ntBASIC16.3■□□□□ 0.2
GDE1Q9NZC3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 MSTO2P-201ENST00000314835 1709 ntBASIC16.3■□□□□ 0.2
GDE1Q9NZC3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDE1Q9NZC3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 DUX4L45-201ENST00000566406 1057 ntBASIC16.29■□□□□ 0.2
GDE1Q9NZC3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 AC103810.3-201ENST00000583567 96 ntBASIC16.29■□□□□ 0.2
GDE1Q9NZC3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 AC008687.7-202ENST00000637404 953 ntBASIC16.29■□□□□ 0.2
GDE1Q9NZC3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GDE1Q9NZC3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 DRD5P1-201ENST00000456605 1438 ntBASIC16.28■□□□□ 0.2
GDE1Q9NZC3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.28■□□□□ 0.2
GDE1Q9NZC3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms