Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SLC25A6P4-201ENST00000586535 553 ntBASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 AC004877.2-201ENST00000623941 599 ntBASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 AC025580.3-201ENST00000617932 1424 ntBASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 KRT19P2-202ENST00000557173 1012 ntBASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD1Q9NXG2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AC020658.6-201ENST00000623564 1870 ntBASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AC024267.1-201ENST00000582320 895 ntBASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AC068137.2-201ENST00000605408 478 ntBASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.12■□□□□ 0.01
THUMPD1Q9NXG2 AC064836.3-201ENST00000607928 673 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms