Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 VN2R19P-201ENST00000442399 1052 ntBASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 AC002347.1-201ENST00000569543 541 ntBASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 AL121912.1-201ENST00000603683 238 ntBASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 CRYGEP-201ENST00000412192 528 ntBASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 LINC02228-204ENST00000642115 2962 ntBASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CDC42SE2Q9NRR3 PMS2P7-201ENST00000506558 1336 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms