Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 AL359183.1-201ENST00000623796 2132 ntBASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 AC105339.3-201ENST00000560043 636 ntBASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHB16Q9NRJ7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 PMS2P4-201ENST00000412466 1052 ntBASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 MIR3909-201ENST00000579518 119 ntBASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 MIR4515-201ENST00000584082 81 ntBASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 AL121912.1-201ENST00000603683 238 ntBASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 AC008735.5-201ENST00000623544 497 ntBASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHB16Q9NRJ7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms