Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 AL022342.1-201ENST00000400363 863 ntBASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 RNA5SP416-201ENST00000516838 111 ntBASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 AC073389.1-201ENST00000595595 795 ntBASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 AC006538.3-201ENST00000612495 578 ntBASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
LRTM1Q9HBL6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 AL590627.1-203ENST00000421194 1026 ntBASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 AC105233.2-201ENST00000523697 349 ntBASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 AF228730.5-201ENST00000530288 346 ntBASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 SPTSSB-204ENST00000617024 1292 ntBASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 AC092865.6-201ENST00000642101 219 ntBASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 TMBIM7P-203ENST00000641617 1718 ntBASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
LRTM1Q9HBL6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRTM1Q9HBL6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms