Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 KRT8P37-201ENST00000451609 1420 ntBASIC15.33■□□□□ 0.04
BRF2Q9HAW0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRF2Q9HAW0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 SSR4P1-203ENST00000599569 2260 ntBASIC15.32■□□□□ 0.04
BRF2Q9HAW0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BRF2Q9HAW0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.31■□□□□ 0.04
BRF2Q9HAW0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 AC005237.2-201ENST00000434368 219 ntBASIC15.31■□□□□ 0.04
BRF2Q9HAW0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 AP000344.2-201ENST00000512987 629 ntBASIC15.31■□□□□ 0.04
BRF2Q9HAW0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 AL450472.2-201ENST00000603663 1156 ntBASIC15.31■□□□□ 0.04
BRF2Q9HAW0 CICP13-201ENST00000422015 2789 ntBASIC15.31■□□□□ 0.04
BRF2Q9HAW0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRF2Q9HAW0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms