Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 TMPRSS11CP-201ENST00000453277 683 ntBASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 KRT17P8-201ENST00000540749 863 ntBASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SCAF1Q9H7N4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SCAF1Q9H7N4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AC132938.2-201ENST00000579188 680 ntBASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 GPR182-203ENST00000622922 591 ntBASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AL591163.1-201ENST00000641757 987 ntBASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AC100757.3-201ENST00000622361 1406 ntBASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AC022144.1-201ENST00000602255 1580 ntBASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SCAF1Q9H7N4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AC092451.2-201ENST00000538746 658 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AC005332.10-201ENST00000612725 619 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AC084121.4-201ENST00000641598 221 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AF228730.8-201ENST00000642140 221 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AC023908.3-201ENST00000564211 3047 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 CASC19-229ENST00000641418 1373 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AC073347.1-201ENST00000421633 2643 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 AL049757.1-201ENST00000616842 1596 ntBASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCAF1Q9H7N4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 DEFT1P-201ENST00000453425 496 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AC253576.1-201ENST00000511645 1156 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 SRPK2P-201ENST00000523408 1100 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 RARRES2P8-201ENST00000566335 367 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AC087752.4-201ENST00000605911 462 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms