Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AL359881.2-201ENST00000602973 570 ntBASIC18.62■□□□□ 0.57
SH2D4AQ9H788 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 PCDH8P1-201ENST00000428983 2773 ntBASIC18.62■□□□□ 0.57
SH2D4AQ9H788 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH2D4AQ9H788 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 RPL13P2-201ENST00000440687 659 ntBASIC18.61■□□□□ 0.57
SH2D4AQ9H788 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 LINC01115-203ENST00000606068 577 ntBASIC18.61■□□□□ 0.57
SH2D4AQ9H788 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 DOC2GP-204ENST00000639052 2548 ntBASIC18.61■□□□□ 0.57
SH2D4AQ9H788 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH2D4AQ9H788 ALOX12P2-203ENST00000570921 1945 ntBASIC18.61■□□□□ 0.57
SH2D4AQ9H788 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 U91328.1-201ENST00000437528 223 ntBASIC18.6■□□□□ 0.57
SH2D4AQ9H788 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 CTBP2P3-201ENST00000585629 1255 ntBASIC18.6■□□□□ 0.57
SH2D4AQ9H788 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH2D4AQ9H788 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH2D4AQ9H788 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH2D4AQ9H788 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.59■□□□□ 0.57
SH2D4AQ9H788 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH2D4AQ9H788 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH2D4AQ9H788 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms