Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.85■□□□□ 0.61
RNF41Q9H4P4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 HMGN1P19-201ENST00000436976 333 ntBASIC18.85■□□□□ 0.61
RNF41Q9H4P4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 BCRP1-201ENST00000444246 691 ntBASIC18.85■□□□□ 0.61
RNF41Q9H4P4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 AC025048.3-201ENST00000590609 569 ntBASIC18.85■□□□□ 0.61
RNF41Q9H4P4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 AC005702.4-201ENST00000618393 416 ntBASIC18.85■□□□□ 0.61
RNF41Q9H4P4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF41Q9H4P4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 AC010491.1-201ENST00000563101 2797 ntBASIC18.84■□□□□ 0.61
RNF41Q9H4P4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF41Q9H4P4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 PCDHA1-201ENST00000378133 2726 ntBASIC18.83■□□□□ 0.61
RNF41Q9H4P4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF41Q9H4P4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC136604.1-201ENST00000418535 575 ntBASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 HNRNPUP1-201ENST00000554987 333 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms