Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 AL135999.2-201ENST00000622438 1686 ntBASIC13.06□□□□□ -0.32
NKX6-2Q9C056 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 HLA-F-220ENST00000434407 884 ntBASIC13.06□□□□□ -0.32
NKX6-2Q9C056 FAM201B-201ENST00000458407 597 ntBASIC13.06□□□□□ -0.32
NKX6-2Q9C056 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CD99P1-205ENST00000527459 561 ntBASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 GPR32P1-201ENST00000601788 811 ntBASIC13.06□□□□□ -0.32
NKX6-2Q9C056 AC092666.2-201ENST00000613287 246 ntBASIC13.06□□□□□ -0.32
NKX6-2Q9C056 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX6-2Q9C056 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 AC007967.3-201ENST00000434308 558 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 ZNF444P1-201ENST00000559497 298 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 AL031432.5-201ENST00000641059 760 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 AL049757.1-201ENST00000616842 1596 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 REXO1L8P-201ENST00000604378 1897 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms