Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 AL691432.1-201ENST00000596308 1422 ntBASIC16.05■□□□□ 0.16
CPNE1Q99829 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE1Q99829 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE1Q99829 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE1Q99829 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE1Q99829 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE1Q99829 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE1Q99829 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE1Q99829 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 AL138918.1-201ENST00000568306 659 ntBASIC16.05■□□□□ 0.16
CPNE1Q99829 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE1Q99829 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 AC099522.2-201ENST00000607001 744 ntBASIC16.05■□□□□ 0.16
CPNE1Q99829 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE1Q99829 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CPNE1Q99829 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE1Q99829 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE1Q99829 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CPNE1Q99829 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.04■□□□□ 0.16
CPNE1Q99829 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE1Q99829 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CPNE1Q99829 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE1Q99829 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE1Q99829 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 AC092127.1-201ENST00000567093 3455 ntBASIC16.04■□□□□ 0.16
CPNE1Q99829 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 TPM4P1-201ENST00000436100 807 ntBASIC16.04■□□□□ 0.16
CPNE1Q99829 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPNE1Q99829 RPL13AP23-201ENST00000480739 586 ntBASIC16.04■□□□□ 0.16
CPNE1Q99829 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE1Q99829 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE1Q99829 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE1Q99829 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE1Q99829 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE1Q99829 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CPNE1Q99829 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE1Q99829 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE1Q99829 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE1Q99829 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AKAP8P1-201ENST00000434743 1349 ntBASIC16.03■□□□□ 0.16
CPNE1Q99829 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC138035.3-201ENST00000622706 2791 ntBASIC16.03■□□□□ 0.16
CPNE1Q99829 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.03■□□□□ 0.16
CPNE1Q99829 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.03■□□□□ 0.16
CPNE1Q99829 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms