Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.74□□□□□ -0.21
COL12A1Q99715 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
COL12A1Q99715 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 AC093813.1-201ENST00000605066 256 ntBASIC13.74□□□□□ -0.21
COL12A1Q99715 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
COL12A1Q99715 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 TUBB8P12-201ENST00000308911 1335 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 TUBB7P-202ENST00000428444 1305 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 TUBB8P7-204ENST00000567960 1332 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.73□□□□□ -0.21
COL12A1Q99715 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.73□□□□□ -0.21
COL12A1Q99715 ALG1L13P-202ENST00000519320 584 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
COL12A1Q99715 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.73□□□□□ -0.21
COL12A1Q99715 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.73□□□□□ -0.21
COL12A1Q99715 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
COL12A1Q99715 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 AC004987.2-201ENST00000395959 1148 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 CNN2P10-201ENST00000443067 918 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 RPL18P13-201ENST00000478088 569 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.73□□□□□ -0.21
COL12A1Q99715 RNA5SP486-201ENST00000515961 83 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.73□□□□□ -0.21
COL12A1Q99715 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.73□□□□□ -0.21
COL12A1Q99715 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.73□□□□□ -0.21
COL12A1Q99715 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 MIR6842-201ENST00000612539 65 ntBASIC13.73□□□□□ -0.21
COL12A1Q99715 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL12A1Q99715 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL12A1Q99715 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.73□□□□□ -0.21
COL12A1Q99715 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
COL12A1Q99715 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.72□□□□□ -0.21
COL12A1Q99715 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.72□□□□□ -0.21
COL12A1Q99715 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
COL12A1Q99715 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.72□□□□□ -0.21
COL12A1Q99715 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
COL12A1Q99715 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 PCDHB18P-201ENST00000524813 2368 ntBASIC13.72□□□□□ -0.21
COL12A1Q99715 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
COL12A1Q99715 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL12A1Q99715 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.72□□□□□ -0.21
COL12A1Q99715 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.72□□□□□ -0.21
COL12A1Q99715 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.72□□□□□ -0.21
COL12A1Q99715 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
COL12A1Q99715 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL12A1Q99715 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.71□□□□□ -0.21
COL12A1Q99715 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.71□□□□□ -0.21
COL12A1Q99715 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL12A1Q99715 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL12A1Q99715 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
COL12A1Q99715 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL12A1Q99715 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL12A1Q99715 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms