Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.47■□□□□ 0.23
CDCA3Q99618 GAPDHP40-201ENST00000505218 1006 ntBASIC16.47■□□□□ 0.23
CDCA3Q99618 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.47■□□□□ 0.23
CDCA3Q99618 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CDCA3Q99618 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.47■□□□□ 0.23
CDCA3Q99618 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.47■□□□□ 0.23
CDCA3Q99618 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.47■□□□□ 0.23
CDCA3Q99618 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDCA3Q99618 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDCA3Q99618 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDCA3Q99618 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 BX284668.4-201ENST00000453917 508 ntBASIC16.46■□□□□ 0.23
CDCA3Q99618 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.46■□□□□ 0.23
CDCA3Q99618 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 MIR4741-201ENST00000579822 90 ntBASIC16.46■□□□□ 0.23
CDCA3Q99618 AC104982.3-201ENST00000581995 514 ntBASIC16.46■□□□□ 0.23
CDCA3Q99618 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDCA3Q99618 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.46■□□□□ 0.23
CDCA3Q99618 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDCA3Q99618 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.46■□□□□ 0.22
CDCA3Q99618 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDCA3Q99618 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 AL662890.1-201ENST00000396818 632 ntBASIC16.45■□□□□ 0.22
CDCA3Q99618 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CDCA3Q99618 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.45■□□□□ 0.22
CDCA3Q99618 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.45■□□□□ 0.22
CDCA3Q99618 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 AL021578.1-201ENST00000613646 709 ntBASIC16.45■□□□□ 0.22
CDCA3Q99618 BX539320.1-201ENST00000623759 877 ntBASIC16.45■□□□□ 0.22
CDCA3Q99618 AC015967.2-201ENST00000624092 234 ntBASIC16.45■□□□□ 0.22
CDCA3Q99618 AC006435.4-201ENST00000625037 234 ntBASIC16.45■□□□□ 0.22
CDCA3Q99618 AL356737.1-201ENST00000634391 234 ntBASIC16.45■□□□□ 0.22
CDCA3Q99618 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDCA3Q99618 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
CDCA3Q99618 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.45■□□□□ 0.22
CDCA3Q99618 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDCA3Q99618 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCA3Q99618 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCA3Q99618 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDCA3Q99618 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCA3Q99618 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCA3Q99618 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCA3Q99618 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDCA3Q99618 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDCA3Q99618 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDCA3Q99618 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms