Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
NDNQ99608 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.16■□□□□ 0.18
NDNQ99608 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.16■□□□□ 0.18
NDNQ99608 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDNQ99608 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NDNQ99608 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 AL589702.1-201ENST00000641229 1509 ntBASIC16.15■□□□□ 0.18
NDNQ99608 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 AC023274.1-201ENST00000418278 595 ntBASIC16.15■□□□□ 0.18
NDNQ99608 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.15■□□□□ 0.18
NDNQ99608 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 AL591424.1-201ENST00000442569 1213 ntBASIC16.15■□□□□ 0.18
NDNQ99608 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.15■□□□□ 0.18
NDNQ99608 AC008677.1-201ENST00000519230 1561 ntBASIC16.15■□□□□ 0.18
NDNQ99608 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.15■□□□□ 0.18
NDNQ99608 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 AL161645.1-201ENST00000622716 1255 ntBASIC16.15■□□□□ 0.18
NDNQ99608 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.15■□□□□ 0.18
NDNQ99608 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.15■□□□□ 0.18
NDNQ99608 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDNQ99608 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
NDNQ99608 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.14■□□□□ 0.18
NDNQ99608 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.14■□□□□ 0.18
NDNQ99608 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
NDNQ99608 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NDNQ99608 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 AP002414.2-201ENST00000591780 3365 ntBASIC16.14■□□□□ 0.17
NDNQ99608 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.14■□□□□ 0.17
NDNQ99608 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NDNQ99608 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.14■□□□□ 0.17
NDNQ99608 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.14■□□□□ 0.17
NDNQ99608 AC002056.1-201ENST00000395613 760 ntBASIC16.14■□□□□ 0.17
NDNQ99608 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 AC112191.1-201ENST00000523689 701 ntBASIC16.14■□□□□ 0.17
NDNQ99608 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.14■□□□□ 0.17
NDNQ99608 AL138918.1-201ENST00000568306 659 ntBASIC16.14■□□□□ 0.17
NDNQ99608 AC002347.1-201ENST00000569543 541 ntBASIC16.14■□□□□ 0.17
NDNQ99608 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.14■□□□□ 0.17
NDNQ99608 FAM197Y3-203ENST00000618346 717 ntBASIC16.14■□□□□ 0.17
NDNQ99608 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NDNQ99608 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NDNQ99608 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.14■□□□□ 0.17
NDNQ99608 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
NDNQ99608 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NDNQ99608 CICP14-201ENST00000629111 2732 ntBASIC16.14■□□□□ 0.17
NDNQ99608 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.14■□□□□ 0.17
NDNQ99608 PMS2P7-201ENST00000506558 1336 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms