Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
S1PR3Q99500 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
S1PR3Q99500 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
S1PR3Q99500 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
S1PR3Q99500 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
S1PR3Q99500 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.31□□□□□ -0.28
S1PR3Q99500 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.31□□□□□ -0.28
S1PR3Q99500 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
S1PR3Q99500 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.3□□□□□ -0.28
S1PR3Q99500 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
S1PR3Q99500 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.3□□□□□ -0.28
S1PR3Q99500 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.3□□□□□ -0.28
S1PR3Q99500 HAUS4P1-201ENST00000406739 1145 ntBASIC13.3□□□□□ -0.28
S1PR3Q99500 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.3□□□□□ -0.28
S1PR3Q99500 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
S1PR3Q99500 AC245100.5-201ENST00000452108 331 ntBASIC13.3□□□□□ -0.28
S1PR3Q99500 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
S1PR3Q99500 PRYP6-201ENST00000514804 343 ntBASIC13.3□□□□□ -0.28
S1PR3Q99500 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.3□□□□□ -0.28
S1PR3Q99500 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.3□□□□□ -0.28
S1PR3Q99500 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.3□□□□□ -0.28
S1PR3Q99500 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.3□□□□□ -0.28
S1PR3Q99500 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.3□□□□□ -0.28
S1PR3Q99500 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 AC073439.1-201ENST00000624121 1774 ntBASIC13.3□□□□□ -0.28
S1PR3Q99500 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.3□□□□□ -0.28
S1PR3Q99500 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S1PR3Q99500 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
S1PR3Q99500 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 AC004832.2-201ENST00000426397 482 ntBASIC13.29□□□□□ -0.28
S1PR3Q99500 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.29□□□□□ -0.28
S1PR3Q99500 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.29□□□□□ -0.28
S1PR3Q99500 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.29□□□□□ -0.28
S1PR3Q99500 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.29□□□□□ -0.28
S1PR3Q99500 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms