Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RNF183Q96D59 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.98□□□□□ -0.49
RNF183Q96D59 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF183Q96D59 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.98□□□□□ -0.49
RNF183Q96D59 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.98□□□□□ -0.49
RNF183Q96D59 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.98□□□□□ -0.49
RNF183Q96D59 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.98□□□□□ -0.49
RNF183Q96D59 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RNF183Q96D59 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF183Q96D59 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.98□□□□□ -0.49
RNF183Q96D59 RARRES2P9-201ENST00000565168 469 ntBASIC11.98□□□□□ -0.49
RNF183Q96D59 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF183Q96D59 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.98□□□□□ -0.49
RNF183Q96D59 AC092364.2-202ENST00000597012 1073 ntBASIC11.98□□□□□ -0.49
RNF183Q96D59 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RNF183Q96D59 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF183Q96D59 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF183Q96D59 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF183Q96D59 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RNF183Q96D59 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 AL513523.2-202ENST00000427283 2040 ntBASIC11.98□□□□□ -0.49
RNF183Q96D59 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF183Q96D59 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF183Q96D59 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF183Q96D59 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 AC068587.6-202ENST00000641839 5619 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RNF183Q96D59 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 AC073439.1-201ENST00000624121 1774 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 AP3S2-216ENST00000617003 1561 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.97□□□□□ -0.49
RNF183Q96D59 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
RNF183Q96D59 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RNF183Q96D59 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF183Q96D59 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RNF183Q96D59 HLA-H-201ENST00000383620 1096 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 MIR943-201ENST00000401286 94 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.97□□□□□ -0.49
RNF183Q96D59 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 AC055876.3-201ENST00000431496 288 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.97□□□□□ -0.49
RNF183Q96D59 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF183Q96D59 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF183Q96D59 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.97□□□□□ -0.49
RNF183Q96D59 SPCS2P1-201ENST00000561636 679 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 AC005498.2-205ENST00000593218 784 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 AL096865.1-201ENST00000606796 927 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 AC138649.4-201ENST00000612222 287 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 AC018529.1-201ENST00000613063 361 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 SPTSSB-204ENST00000617024 1292 ntBASIC11.97□□□□□ -0.49
RNF183Q96D59 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF183Q96D59 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms