Protein–RNA interactions for Protein: Q96AE4

FUBP1, Far upstream element-binding protein 1, humanhuman

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1Q96AE4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 AC022144.1-201ENST00000602255 1580 ntBASIC16.03■□□□□ 0.16
FUBP1Q96AE4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FUBP1Q96AE4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 AC087499.5-201ENST00000452760 1342 ntBASIC16.02■□□□□ 0.16
FUBP1Q96AE4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 AL035633.1-201ENST00000406139 838 ntBASIC16.02■□□□□ 0.16
FUBP1Q96AE4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
FUBP1Q96AE4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.02■□□□□ 0.15
FUBP1Q96AE4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AC009477.1-201ENST00000452936 217 ntBASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AL139010.1-201ENST00000454878 894 ntBASIC16.01■□□□□ 0.15
FUBP1Q96AE4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 LINC02560-201ENST00000596379 459 ntBASIC16.01■□□□□ 0.15
FUBP1Q96AE4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AC008738.7-201ENST00000609744 511 ntBASIC16.01■□□□□ 0.15
FUBP1Q96AE4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AP005117.1-202ENST00000581724 1908 ntBASIC16.01■□□□□ 0.15
FUBP1Q96AE4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.01■□□□□ 0.15
FUBP1Q96AE4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FUBP1Q96AE4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16■□□□□ 0.15
FUBP1Q96AE4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16■□□□□ 0.15
FUBP1Q96AE4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms