Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AL591424.1-201ENST00000442569 1213 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC002347.1-201ENST00000569543 541 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC027601.4-201ENST00000611259 610 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC010507.1-201ENST00000633895 436 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC092127.1-201ENST00000567093 3455 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC134407.2-201ENST00000625089 1978 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC140658.5-201ENST00000438532 169 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC023141.13-201ENST00000604991 943 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC064836.3-201ENST00000607928 673 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AP001282.1-201ENST00000531301 1499 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.43□□□□□ -0.1
PTP4A1Q93096 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTP4A1Q93096 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTP4A1Q93096 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms