Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AL591424.1-201ENST00000442569 1213 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC002347.1-201ENST00000569543 541 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC027601.4-201ENST00000611259 610 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC010507.1-201ENST00000633895 436 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC092127.1-201ENST00000567093 3455 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 AC134407.2-201ENST00000625089 1978 ntBASIC14.45□□□□□ -0.1
PTP4A1Q93096 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PTP4A1Q93096 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTP4A1Q93096 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC140658.5-201ENST00000438532 169 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC023141.13-201ENST00000604991 943 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 AC064836.3-201ENST00000607928 673 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 AP001282.1-201ENST00000531301 1499 ntBASIC14.44□□□□□ -0.1
PTP4A1Q93096 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTP4A1Q93096 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
PTP4A1Q93096 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.43□□□□□ -0.1
PTP4A1Q93096 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTP4A1Q93096 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTP4A1Q93096 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms