Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF1Q92994 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 CNN2P11-201ENST00000429351 262 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 AC004967.1-201ENST00000453589 447 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF1Q92994 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
BRF1Q92994 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF1Q92994 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF1Q92994 BANF1P1-201ENST00000553684 263 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 AC026150.2-201ENST00000564693 1156 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.87■□□□□ 0.61
BRF1Q92994 AC027612.4-201ENST00000605371 583 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 REXO1L1P-202ENST00000608646 1974 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 AL596442.2-201ENST00000610240 980 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 AC018529.1-201ENST00000613063 361 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.87■□□□□ 0.61
BRF1Q92994 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.87■□□□□ 0.61
BRF1Q92994 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF1Q92994 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF1Q92994 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRF1Q92994 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BRF1Q92994 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BRF1Q92994 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.87■□□□□ 0.61
BRF1Q92994 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
BRF1Q92994 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.86■□□□□ 0.61
BRF1Q92994 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
BRF1Q92994 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRF1Q92994 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.86■□□□□ 0.61
BRF1Q92994 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.86■□□□□ 0.61
BRF1Q92994 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
BRF1Q92994 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.86■□□□□ 0.61
BRF1Q92994 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRF1Q92994 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRF1Q92994 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BRF1Q92994 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRF1Q92994 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
BRF1Q92994 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.85■□□□□ 0.61
BRF1Q92994 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
BRF1Q92994 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
BRF1Q92994 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
BRF1Q92994 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRF1Q92994 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF1Q92994 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
BRF1Q92994 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF1Q92994 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.85■□□□□ 0.61
BRF1Q92994 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.85■□□□□ 0.61
BRF1Q92994 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.85■□□□□ 0.61
BRF1Q92994 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRF1Q92994 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.85■□□□□ 0.61
BRF1Q92994 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
BRF1Q92994 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRF1Q92994 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRF1Q92994 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms