Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PHF3Q92576 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.45□□□□□ -0.1
PHF3Q92576 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PHF3Q92576 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PHF3Q92576 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.45□□□□□ -0.1
PHF3Q92576 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
PHF3Q92576 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.45□□□□□ -0.1
PHF3Q92576 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHF3Q92576 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 SPDYE19P-201ENST00000338590 713 ntBASIC14.44□□□□□ -0.1
PHF3Q92576 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 TPRX2P-201ENST00000535362 881 ntBASIC14.44□□□□□ -0.1
PHF3Q92576 AC044860.1-202ENST00000559481 777 ntBASIC14.44□□□□□ -0.1
PHF3Q92576 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 CHCHD2P3-201ENST00000603038 451 ntBASIC14.44□□□□□ -0.1
PHF3Q92576 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.44□□□□□ -0.1
PHF3Q92576 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PHF3Q92576 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PHF3Q92576 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PHF3Q92576 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PHF3Q92576 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PHF3Q92576 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PHF3Q92576 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PHF3Q92576 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.44□□□□□ -0.1
PHF3Q92576 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.44□□□□□ -0.1
PHF3Q92576 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PHF3Q92576 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHF3Q92576 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.44□□□□□ -0.1
PHF3Q92576 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.43□□□□□ -0.1
PHF3Q92576 AL592424.1-201ENST00000563624 1536 ntBASIC14.43□□□□□ -0.1
PHF3Q92576 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PHF3Q92576 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PHF3Q92576 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PHF3Q92576 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 AC079776.1-201ENST00000401540 1152 ntBASIC14.43□□□□□ -0.1
PHF3Q92576 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 NME2P1-201ENST00000426182 414 ntBASIC14.43□□□□□ -0.1
PHF3Q92576 DFFBP1-201ENST00000433250 979 ntBASIC14.43□□□□□ -0.1
PHF3Q92576 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.43□□□□□ -0.1
PHF3Q92576 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF3Q92576 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF3Q92576 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PHF3Q92576 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHF3Q92576 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.43□□□□□ -0.1
PHF3Q92576 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms