Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 FNTAP2-201ENST00000430308 634 ntBASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 Z93015.1-201ENST00000451718 390 ntBASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 UPF3AP2-201ENST00000457924 1132 ntBASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 GPAA1P2-202ENST00000606848 1787 ntBASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3TC2Q8TF17 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 AC005252.2-201ENST00000624630 1141 ntBASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3TC2Q8TF17 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 AL662890.1-201ENST00000396818 632 ntBASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3TC2Q8TF17 VDAC1P7-201ENST00000462417 847 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms