Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP1Q8TDR0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPDYE11-202ENST00000450699 704 ntBASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPDYE9P-201ENST00000570642 692 ntBASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 AC027307.2-201ENST00000591252 911 ntBASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPDYE10P-202ENST00000612005 668 ntBASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPDYE8P-202ENST00000612377 668 ntBASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SPTSSB-204ENST00000617024 1292 ntBASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 AC008267.7-201ENST00000624570 1194 ntBASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP1Q8TDR0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP1Q8TDR0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 YBX2P1-201ENST00000394192 760 ntBASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 AC092902.6-201ENST00000641783 218 ntBASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms