Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.03■□□□□ -0
NUP43Q8NFH3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.03■□□□□ -0
NUP43Q8NFH3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.03■□□□□ -0
NUP43Q8NFH3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.03■□□□□ -0
NUP43Q8NFH3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.03■□□□□ -0
NUP43Q8NFH3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 AC055717.3-201ENST00000622967 595 ntBASIC15.03■□□□□ -0
NUP43Q8NFH3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.03■□□□□ -0
NUP43Q8NFH3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.03■□□□□ -0
NUP43Q8NFH3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 NORAD-201ENST00000565493 5339 ntBASIC15.02■□□□□ -0
NUP43Q8NFH3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.02■□□□□ -0
NUP43Q8NFH3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
NUP43Q8NFH3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.02■□□□□ -0
NUP43Q8NFH3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.02■□□□□ -0
NUP43Q8NFH3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
NUP43Q8NFH3 RPSAP43-201ENST00000402237 625 ntBASIC15.02■□□□□ -0
NUP43Q8NFH3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.02■□□□□ -0
NUP43Q8NFH3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.02■□□□□ -0
NUP43Q8NFH3 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 RARRES2P9-201ENST00000565168 469 ntBASIC15.02■□□□□ -0
NUP43Q8NFH3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NUP43Q8NFH3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP43Q8NFH3 AL513210.1-201ENST00000629608 234 ntBASIC15.02■□□□□ -0
NUP43Q8NFH3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 BNIP3P1-202ENST00000550043 1585 ntBASIC15.02□□□□□ -0.01
NUP43Q8NFH3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.02□□□□□ -0.01
NUP43Q8NFH3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP43Q8NFH3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 AC004461.1-201ENST00000412461 403 ntBASIC15.01□□□□□ -0.01
NUP43Q8NFH3 UPF3AP3-201ENST00000420996 769 ntBASIC15.01□□□□□ -0.01
NUP43Q8NFH3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 KRT18P32-201ENST00000424695 1287 ntBASIC15.01□□□□□ -0.01
NUP43Q8NFH3 RPS8P6-201ENST00000426177 609 ntBASIC15.01□□□□□ -0.01
NUP43Q8NFH3 AL139010.1-201ENST00000454878 894 ntBASIC15.01□□□□□ -0.01
NUP43Q8NFH3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms