Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 GPAA1P2-202ENST00000606848 1787 ntBASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 MRPL22P1-201ENST00000505398 616 ntBASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 AC138466.5-201ENST00000624002 808 ntBASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 RBM4-207ENST00000506523 654 ntTSL 3 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 AC093826.1-201ENST00000508655 993 ntBASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 AL590235.1-201ENST00000564650 861 ntBASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 MED11-202ENST00000573708 802 ntTSL 2 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 AC090164.2-201ENST00000611487 516 ntBASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HMCN2Q8NDA2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 AC010141.1-201ENST00000411585 623 ntBASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 CASP2-203ENST00000392925 616 ntTSL 3 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 RNLS-203ENST00000437752 525 ntTSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 PGAM1P12-201ENST00000505622 748 ntBASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 CR383656.3-201ENST00000551315 183 ntBASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 AL645933.1-201ENST00000440087 609 ntBASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 PUDPP3-201ENST00000445368 636 ntBASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
HMCN2Q8NDA2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 AC113347.2-201ENST00000512350 279 ntBASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 CMC2-224ENST00000630396 481 ntTSL 5 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 E2F3P2-201ENST00000447755 1422 ntBASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC8.65□□□□□ -1.03
HMCN2Q8NDA2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMCN2Q8NDA2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC8.64□□□□□ -1.03
HMCN2Q8NDA2 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC8.64□□□□□ -1.03
HMCN2Q8NDA2 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC8.64□□□□□ -1.03
HMCN2Q8NDA2 AC090510.3-201ENST00000615831 821 ntBASIC8.64□□□□□ -1.03
HMCN2Q8NDA2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC8.64□□□□□ -1.03
HMCN2Q8NDA2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms